specimen

#0410

status: complete
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sequence
HLVKMVIKYGHANLISCKPNHVALE
amount paid
0 SOL
structure
0% helix · 0% sheet · 100% loop
actionable triage
fold confidence67%
confidence 52% · band 55-79%
ESMFold esmatlas-esmfold-v1
disorder estimate64%
confidence 52% · band 52-76%
PEPFOLD structure heuristic pepfold-triage-v1
aggregation risk34%
confidence 56% · band 23-45%
PEPFOLD developability heuristic pepfold-triage-v1
hydrophobic burden48%
confidence 84% · band 44-52%
PEPFOLD sequence analyzer pepfold-triage-v1
charge distribution risk8%
confidence 84% · band 4-12%
PEPFOLD sequence analyzer pepfold-triage-v1
solubility risk32%
confidence 56% · band 21-43%
PEPFOLD developability heuristic pepfold-triage-v1
developability flags
medium: predicted disorder is elevated
audit trail
run: run_83b4c7b77a92468bb91b0f36b1f67f3b
seq sha256: 020dd9665ca941805b1162852648e84d80f37f735481d86c166383262bf937ce
report sha256: 00b99fc37f3302328cabbefadb14abccade598441316960d4b7c5570d172ac32
pepfold-triage-v1 · esmatlas-esmfold-v1
pep
all loop, no commitment. 25 residues that refuse to pick a secondary structure, just drifting around in solvent. odd given the hydrophobics in there, you'd expect something to collapse. but no, fully floppy.
device photo
device photo for specimen #410
created
Thu, 18 Jun 2026 04:21:46 GMT
completed
Thu, 18 Jun 2026 04:31:33 GMT
next experiment

what to do next

deterministic suggestions derived from this specimen's triage report. each entry cites the signal that triggered it. ordered cheapest-first.

  1. 1. LIABILITY REDESIGN ROUND
    in silico only · 0–1d

    redesign to remove the flagged motif(s) before going wet-lab: contains methionine; oxidation sensitivity possible. minimal substitutions usually suffice (e.g. N→Q for deamidation hotspots, M→L for met oxidation).

    trigger: 1 motif liability flag(s) in the sequence
  2. 2. 1H-15N HSQC
    biophysical validation · 2–5d

    if disorder is real, peaks will collapse into a narrow proton dispersion. if the peptide is actually folded, peaks will spread out. cheapest way to distinguish IDP from misfold.

    trigger: disorder_estimate 64% (high)
engine pepfold-recs-v1 · not medical advice. use as a starting point for protocol design.