specimen

#0036

status: complete
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sequence
SYSMEHFRWGKPVGKKRRPVKVYP
amount paid
0 SOL
structure
0% helix · 0% sheet · 100% loop
actionable triage
fold confidence59%
confidence 52% · band 47-71%
ESMFold esmatlas-esmfold-v1
disorder estimate92%
confidence 52% · band 80-100%
PEPFOLD structure heuristic pepfold-triage-v1
aggregation risk35%
confidence 56% · band 24-46%
PEPFOLD developability heuristic pepfold-triage-v1
hydrophobic burden33%
confidence 84% · band 29-37%
PEPFOLD sequence analyzer pepfold-triage-v1
charge distribution risk25%
confidence 84% · band 21-29%
PEPFOLD sequence analyzer pepfold-triage-v1
solubility risk33%
confidence 56% · band 22-44%
PEPFOLD developability heuristic pepfold-triage-v1
developability flags
medium: structure confidence is limited
medium: predicted disorder is elevated
audit trail
run: run_01a2543a6552406bab445dec5be0a54b
seq sha256: 750c71c33c5eca2419b3cef16aa0e3e2e978c46f3d9ec21ff52aa1d20b12d626
report sha256: a2f2353b495c823865b6507f8e9c8979e9755d9e022ae72971521258c7e976b0
pepfold-triage-v1 · esmatlas-esmfold-v1
pep
all loop, no structure, just vibes. heavy on lysines and arginines though, very positively charged, the kind of sequence that binds dna or rna without asking permission. looks like an acth fragment honestly.
device photo
device photo for specimen #36
created
Tue, 16 Jun 2026 04:03:57 GMT
completed
Tue, 16 Jun 2026 04:18:01 GMT
next experiment

what to do next

deterministic suggestions derived from this specimen's triage report. each entry cites the signal that triggered it. ordered cheapest-first.

  1. 1. LIABILITY REDESIGN ROUND
    in silico only · 0–1d

    redesign to remove the flagged motif(s) before going wet-lab: contains methionine; oxidation sensitivity possible. minimal substitutions usually suffice (e.g. N→Q for deamidation hotspots, M→L for met oxidation).

    trigger: 1 motif liability flag(s) in the sequence
  2. 2. CD SPECTROSCOPY
    biophysical validation · 1–3d

    experimental secondary structure check. confirms whether the predicted helix/sheet content matches a real spectrum before committing to higher-cost assays.

    trigger: fold_confidence 59% (model is uncertain)
  3. 3. 1H-15N HSQC
    biophysical validation · 2–5d

    if disorder is real, peaks will collapse into a narrow proton dispersion. if the peptide is actually folded, peaks will spread out. cheapest way to distinguish IDP from misfold.

    trigger: disorder_estimate 92% (high)
engine pepfold-recs-v1 · not medical advice. use as a starting point for protocol design.