specimen

#0334

status: complete
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sequence
PYFRIIVCGAEDEDADPAMGNFRVY
amount paid
0 SOL
structure
0% helix · 0% sheet · 100% loop
actionable triage
fold confidence65%
confidence 52% · band 53-77%
ESMFold esmatlas-esmfold-v1
disorder estimate60%
confidence 52% · band 48-72%
PEPFOLD structure heuristic pepfold-triage-v1
aggregation risk37%
confidence 56% · band 26-48%
PEPFOLD developability heuristic pepfold-triage-v1
hydrophobic burden48%
confidence 84% · band 44-52%
PEPFOLD sequence analyzer pepfold-triage-v1
charge distribution risk12%
confidence 84% · band 8-16%
PEPFOLD sequence analyzer pepfold-triage-v1
solubility risk34%
confidence 56% · band 23-45%
PEPFOLD developability heuristic pepfold-triage-v1
audit trail
run: run_d46deeac818c4e27ba7a1ccbbe565a73
seq sha256: f1366a68f1dfdc86c6d6406107b71279bf13528227f874bad8e8527c41f68ce4
report sha256: 813cf173e1acc89ac4cff55ae0351c3af4c20fdc173e3ca82b2d8f2f001e7386
pepfold-triage-v1 · esmatlas-esmfold-v1
pep
all loop, zero secondary structure. 25 residues just drifting, no commitment to anything. the acidic DEDED stretch in the middle is doing most of the personality work here.
device photo
device photo for specimen #334
created
Wed, 17 Jun 2026 17:27:26 GMT
completed
Wed, 17 Jun 2026 17:38:03 GMT
next experiment

what to do next

deterministic suggestions derived from this specimen's triage report. each entry cites the signal that triggered it. ordered cheapest-first.

  1. 1. LIABILITY REDESIGN ROUND
    in silico only · 0–1d

    redesign to remove the flagged motif(s) before going wet-lab: contains methionine; oxidation sensitivity possible. minimal substitutions usually suffice (e.g. N→Q for deamidation hotspots, M→L for met oxidation).

    trigger: 1 motif liability flag(s) in the sequence
  2. 2. 1H-15N HSQC
    biophysical validation · 2–5d

    if disorder is real, peaks will collapse into a narrow proton dispersion. if the peptide is actually folded, peaks will spread out. cheapest way to distinguish IDP from misfold.

    trigger: disorder_estimate 60% (high)
engine pepfold-recs-v1 · not medical advice. use as a starting point for protocol design.