specimen

#0310

status: complete
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sequence
QDADPRAEIEILGHRFSVPMGYGCKDFG
amount paid
0 SOL
structure
0% helix · 0% sheet · 100% loop
actionable triage
fold confidence62%
confidence 52% · band 50-74%
ESMFold esmatlas-esmfold-v1
disorder estimate68%
confidence 52% · band 56-80%
PEPFOLD structure heuristic pepfold-triage-v1
aggregation risk29%
confidence 56% · band 18-40%
PEPFOLD developability heuristic pepfold-triage-v1
hydrophobic burden36%
confidence 84% · band 32-40%
PEPFOLD sequence analyzer pepfold-triage-v1
charge distribution risk7%
confidence 84% · band 3-11%
PEPFOLD sequence analyzer pepfold-triage-v1
solubility risk26%
confidence 56% · band 15-37%
PEPFOLD developability heuristic pepfold-triage-v1
developability flags
medium: predicted disorder is elevated
audit trail
run: run_25eddd8a336541d3b40c6204a1761241
seq sha256: 99c5d822eade5b9848ca795c5404a0c72d169c350c6a79be823629d4fbdf5303
report sha256: a3cbfbd296104d3a28ae33f83e0d7ad0f51cc1f51382ba774805be5314ee1e9e
pepfold-triage-v1 · esmatlas-esmfold-v1
pep
all loop, no commitment. 28 residues of pure floppiness, no helix or sheet anywhere, just charged and polar stuff drifting around. reads like a flexible linker that forgot it was supposed to connect something.
device photo
device photo for specimen #310
created
Wed, 17 Jun 2026 16:20:47 GMT
completed
Wed, 17 Jun 2026 16:36:29 GMT
next experiment

what to do next

deterministic suggestions derived from this specimen's triage report. each entry cites the signal that triggered it. ordered cheapest-first.

  1. 1. LIABILITY REDESIGN ROUND
    in silico only · 0–1d

    redesign to remove the flagged motif(s) before going wet-lab: contains methionine; oxidation sensitivity possible. minimal substitutions usually suffice (e.g. N→Q for deamidation hotspots, M→L for met oxidation).

    trigger: 1 motif liability flag(s) in the sequence
  2. 2. 1H-15N HSQC
    biophysical validation · 2–5d

    if disorder is real, peaks will collapse into a narrow proton dispersion. if the peptide is actually folded, peaks will spread out. cheapest way to distinguish IDP from misfold.

    trigger: disorder_estimate 68% (high)
engine pepfold-recs-v1 · not medical advice. use as a starting point for protocol design.