specimen

#0183

status: complete
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sequence
RETAYPHRTNVVPYGATAVLLRPSPLEIERRAVSTRMDV
amount paid
0 SOL
structure
0% helix · 0% sheet · 100% loop
actionable triage
fold confidence64%
confidence 52% · band 52-76%
ESMFold esmatlas-esmfold-v1
disorder estimate74%
confidence 52% · band 62-86%
PEPFOLD structure heuristic pepfold-triage-v1
aggregation risk32%
confidence 56% · band 21-43%
PEPFOLD developability heuristic pepfold-triage-v1
hydrophobic burden41%
confidence 84% · band 37-45%
PEPFOLD sequence analyzer pepfold-triage-v1
charge distribution risk5%
confidence 84% · band 1-9%
PEPFOLD sequence analyzer pepfold-triage-v1
solubility risk28%
confidence 56% · band 17-39%
PEPFOLD developability heuristic pepfold-triage-v1
developability flags
medium: predicted disorder is elevated
audit trail
run: run_038f1f76b92545edb1947b9a49d9ecf9
seq sha256: b89e1496e9bcc3f735aca2994b3b3d62f97db56b2ed1b0b77d2ad30fd86a2076
report sha256: 6b1656f46116560a990782eec6534af14358b248484aeb7b65ffcda31252e17a
pepfold-triage-v1 · esmatlas-esmfold-v1
pep
all loop, no structure at all. 39 residues just drifting, no helix daring to form, no sheet trying its luck. reads like a disordered region that escaped from a larger protein and never found its way back.
device photo
device photo for specimen #183
created
Tue, 16 Jun 2026 07:33:14 GMT
completed
Tue, 16 Jun 2026 08:04:25 GMT
next experiment

what to do next

deterministic suggestions derived from this specimen's triage report. each entry cites the signal that triggered it. ordered cheapest-first.

  1. 1. LIABILITY REDESIGN ROUND
    in silico only · 0–1d

    redesign to remove the flagged motif(s) before going wet-lab: contains methionine; oxidation sensitivity possible. minimal substitutions usually suffice (e.g. N→Q for deamidation hotspots, M→L for met oxidation).

    trigger: 1 motif liability flag(s) in the sequence
  2. 2. 1H-15N HSQC
    biophysical validation · 2–5d

    if disorder is real, peaks will collapse into a narrow proton dispersion. if the peptide is actually folded, peaks will spread out. cheapest way to distinguish IDP from misfold.

    trigger: disorder_estimate 74% (high)
engine pepfold-recs-v1 · not medical advice. use as a starting point for protocol design.