specimen

#0011

status: complete
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sequence
MKWVTFISLLLLFSSAYS
amount paid
0.025 SOL
structure
89% helix · 0% sheet · 11% loop
actionable triage
fold confidence1%
confidence 78% · band 0-6%
ESMFold esmatlas-esmfold-v1+fixture
disorder estimate46%
confidence 78% · band 41-52%
PEPFOLD structure heuristic pepfold-triage-v1
aggregation risk47%
confidence 74% · band 40-53%
PEPFOLD developability heuristic pepfold-triage-v1
hydrophobic burden67%
confidence 84% · band 63-71%
PEPFOLD sequence analyzer pepfold-triage-v1
charge distribution risk6%
confidence 84% · band 2-10%
PEPFOLD sequence analyzer pepfold-triage-v1
solubility risk43%
confidence 74% · band 37-50%
PEPFOLD developability heuristic pepfold-triage-v1
developability flags
medium: structure confidence is limited
audit trail
run: run_be20d2f75c9348579fa3c742ba5e957e
seq sha256: 7d5253f399a813ea6d69a60f7358dbaee80cc3e46be43805f81eb76ce4bd0380
report sha256: 555e063a46ff11aa054e9b9f38c2dcb2f0ea8fdddc7b9669ea0573cabb17fab9
pepfold-triage-v1 · esmatlas-esmfold-v1+fixture
pep
89% helix, signal-peptide vibes. hydrophobic as hell.
device photo
device photo for specimen #11
created
Tue, 02 Jun 2026 13:50:37 GMT
completed
Mon, 01 Jun 2026 00:00:00 GMT
next experiment

what to do next

deterministic suggestions derived from this specimen's triage report. each entry cites the signal that triggered it. ordered cheapest-first.

  1. 1. LIABILITY REDESIGN ROUND
    in silico only · 0–1d

    redesign to remove the flagged motif(s) before going wet-lab: contains methionine; oxidation sensitivity possible, long hydrophobic run may increase aggregation risk. minimal substitutions usually suffice (e.g. N→Q for deamidation hotspots, M→L for met oxidation).

    trigger: 2 motif liability flag(s) in the sequence
  2. 2. CD SPECTROSCOPY
    biophysical validation · 1–3d

    experimental secondary structure check. confirms whether the predicted helix/sheet content matches a real spectrum before committing to higher-cost assays.

    trigger: fold_confidence 1% (model is uncertain)
  3. 3. SERUM STABILITY + SOLUBILITY CURVE
    biophysical validation · 3–7d

    track peptide concentration in 100% human serum over 0/1/4/24h; in parallel run a solubility titration in PBS. tells you whether the peptide survives long enough to act.

    trigger: hydrophobic_burden 67% (high)
engine pepfold-recs-v1 · not medical advice. use as a starting point for protocol design.