{
  "report_format_version": "pepfold-report-v1",
  "generated_at": "2026-08-05T06:10:07.783Z",
  "specimen": {
    "number": 46,
    "sequence": "NVPVNEAESDNVNSAGQQSISISTHSSER",
    "sequence_length": 29,
    "status": "complete",
    "wallet": "DGPhtTEZfV3p8EhKe38AfoznKrac5q56LmYp2oEU1qMx",
    "amount_sol": 0,
    "tx_hash": "2gHUbymtgbXCRddGiF3fyduWEHBZMVQpwLu6pRzoHEH7jP8LskqrmfwN9KdZKGXQqHn1gmng1yXXPz38FomHzy6b",
    "created_at": "2026-06-16T04:09:36.325072+00:00",
    "completed_at": "2026-06-16T04:31:05.040581+00:00"
  },
  "structure": {
    "pdb_url": "https://mrzziawbddodlpywncfy.supabase.co/storage/v1/object/public/pdb-files/2065a7d5-5441-4848-90f2-b99dd57ec45b.pdb",
    "helix_pct": 0,
    "sheet_pct": 0,
    "loop_pct": 100
  },
  "triage": {
    "models": {
      "fold_model": {
        "name": "ESMFold",
        "version": "esmatlas-esmfold-v1"
      },
      "triage_model": {
        "name": "PEPFOLD heuristic triage",
        "version": "pepfold-triage-v1"
      },
      "comment_model": {
        "name": "Claude",
        "version": "claude-opus-4-7"
      }
    },
    "run_id": "run_e05beb80fdca466e8eee1f2696f8c3bb",
    "metrics": [
      {
        "id": "fold_confidence",
        "label": "fold confidence",
        "value": 0.657,
        "source": {
          "model": "ESMFold",
          "version": "esmatlas-esmfold-v1"
        },
        "confidence": 0.52,
        "evidence_note": "derived from mean pLDDT on CA atoms",
        "confidence_band": [
          0.537,
          0.777
        ],
        "not_enough_confidence": true
      },
      {
        "id": "disorder_estimate",
        "label": "disorder estimate",
        "value": 0.793,
        "source": {
          "model": "PEPFOLD structure heuristic",
          "version": "pepfold-triage-v1"
        },
        "confidence": 0.52,
        "evidence_note": "estimated from loop proportion and low-confidence structure regions",
        "confidence_band": [
          0.673,
          0.913
        ],
        "not_enough_confidence": true
      },
      {
        "id": "aggregation_risk",
        "label": "aggregation risk",
        "value": 0.227,
        "source": {
          "model": "PEPFOLD developability heuristic",
          "version": "pepfold-triage-v1"
        },
        "confidence": 0.56,
        "evidence_note": "hydrophobic burden, aromatic burden, charge, and long hydrophobic runs",
        "confidence_band": [
          0.117,
          0.337
        ],
        "not_enough_confidence": false
      },
      {
        "id": "hydrophobic_burden",
        "label": "hydrophobic burden",
        "value": 0.241,
        "source": {
          "model": "PEPFOLD sequence analyzer",
          "version": "pepfold-triage-v1"
        },
        "confidence": 0.84,
        "evidence_note": "fraction of hydrophobic residues in sequence",
        "confidence_band": [
          0.201,
          0.281
        ],
        "not_enough_confidence": false
      },
      {
        "id": "charge_distribution_risk",
        "label": "charge distribution risk",
        "value": 0.103,
        "source": {
          "model": "PEPFOLD sequence analyzer",
          "version": "pepfold-triage-v1"
        },
        "confidence": 0.84,
        "evidence_note": "absolute net charge normalized by sequence length",
        "confidence_band": [
          0.063,
          0.143
        ],
        "not_enough_confidence": false
      },
      {
        "id": "solubility_risk",
        "label": "solubility risk",
        "value": 0.205,
        "source": {
          "model": "PEPFOLD developability heuristic",
          "version": "pepfold-triage-v1"
        },
        "confidence": 0.56,
        "evidence_note": "composite of aggregation risk, hydrophobic burden, and charge",
        "confidence_band": [
          0.095,
          0.315
        ],
        "not_enough_confidence": false
      },
      {
        "id": "developability_risk",
        "label": "developability risk",
        "value": 0.33,
        "source": {
          "model": "PEPFOLD developability heuristic",
          "version": "pepfold-triage-v1"
        },
        "confidence": 0.56,
        "evidence_note": "composite developability indicator used for triage",
        "confidence_band": [
          0.22,
          0.44
        ],
        "not_enough_confidence": false
      }
    ],
    "generated_at": "2026-06-16T04:29:44.791264+00:00",
    "report_version": "phase-a.v1",
    "sequence_length": 29,
    "synthesis_hints": [],
    "motif_liabilities": [],
    "developability_flags": [
      {
        "flag": "high_disorder_estimate",
        "reason": "predicted disorder is elevated",
        "severity": "medium"
      }
    ],
    "low_confidence_reasons": [
      "DSSP unavailable; secondary structure uses pLDDT fallback."
    ]
  },
  "audit": {
    "input": {
      "sequence_length": 29,
      "sequence_sha256": "24e324a67b60cf4ff45ae417cfc31b71044e2e88dd6ec10e0aa8daa71c20e0ed"
    },
    "output": {
      "report_sha256": "ba50a8613c2f54a3a5ede18dbb39d2f1163ab5341d6f2f681e333b118d84a489"
    },
    "run_id": "run_e05beb80fdca466e8eee1f2696f8c3bb",
    "timestamp": "2026-06-16T04:29:44.791359+00:00",
    "pipeline_versions": {
      "pep_model_version": "claude-opus-4-7",
      "fold_model_version": "esmatlas-esmfold-v1",
      "triage_model_version": "pepfold-triage-v1",
      "secondary_structure_source": "plddt_fallback"
    }
  },
  "attestation": null,
  "next_experiments": {
    "engine": "pepfold-recs-v1",
    "recommendations": [
      {
        "id": "nmr_hsqc",
        "technique": "1H-15N HSQC",
        "rationale": "if disorder is real, peaks will collapse into a narrow proton dispersion. if the peptide is actually folded, peaks will spread out. cheapest way to distinguish IDP from misfold.",
        "evidence": "disorder_estimate 79% (high)",
        "turnaround_days": [
          2,
          5
        ],
        "tier": "biophysical_validation"
      }
    ]
  },
  "comment": "zero structure. 29 residues of pure loop, no helix, no sheet, just a wet noodle of serines and asparagines drifting through space. polar, floppy, undecided. probably intrinsically disordered and proud of it.",
  "tweet": {
    "id": "2066740318654140790",
    "url": "https://x.com/pepfoldagent/status/2066740318654140790"
  }
}